Department of Veterinary
Microbiology and Parasitology, Sokoine University of Agriculture, P.
O. Box 3019, Morogoro, Tanzania
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Little is known on the
molecular characteristics of genome segments A and B of the African very
virulent (VV) infectious bursal disease (IBD) virus (VV-IBDV) variant
strains. In this study, the nucleotide sequence of genome segments A and
B encoding VP5, precursor polyprotein (NH2-VP2-VP4-VP3-COOH)
and VP1 for an African very virulent IBDV, KMRG-48 strain, was
determined. The VP5, precursor polyprotein and VP1 coding regions of
KMRG-48 consisted of 437 nucleotides (145 deduced amino acids), 3036
nucleotides (1012 deduced amino acids) and 2637 nucleotides (879 deduced
amino acids), respectively. Comparison of deduced amino acid sequences
of serotype 1 IBDVs revealed 6 unique amino acid residues at positions
223 (S), 296 (F), 343 (S), 384 (I), 721 (T) and 960 (D) in precursor
polyprotein. KMRG-48 also conserved 18 amino acid residues, which are
found only in VV-IBDVs. Of these unique amino acids, 3 were in VP5, 4
were in VP2, 2 were in VP4, 3 were in VP3 and 6 were in VP1.
Phylogenetic analysis based on nucleotide sequences of VP5, precursor
polyprotein, VP2, VP4, VP3 and VP1 revealed that KMRG-48 belonged to the
VV genotype. The tree topologies obtained for the nucleotide sequences
of VP5, precursor polyprotein, VP2, VP4 and VP3 were the same while the
tree topology for the nucleotide sequence of VP1 was quite different
compared with that obtained from nucleotide sequences of VP5, precursor
polyprotein, VP2, VP4 and VP3, suggesting a possibility of genetic
reassortment to contribute in the emergence of VV-IBDV. Experimental
infection of susceptible chickens with KMRG-48 confirmed that the virus
is a VV-IBDV exhibiting VV phenotype. Taken together, these findings
demonstrate that KMRG-48 is a VV-IBDV whose genome segments A and B are
derived from VV-IBDV, and that the conserved unique amino acids could
influence its virulence and lethality.
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